Category Archives: Skidaway Institute of Oceanography

New weather station goes online

UGA Skidaway Institute’s new weather station became operational in early May.

The weather station includes a 30-foot-tall tower on the pier at Priests Landing. It has a Gill Instruments GMX531 Weather Station, collecting wind direction and speed, air temperature, relative humidity, atmospheric pressure, solar radiation and precipitation at five minute intervals. The station is powered by a solar panel, and data is sent by a cellular link to a website for display. This installation is part of a National Weather Service-funded effort to improve regional weather forecasts.

The available current and historic data can be accessed HERE. Select “Skidaway 1,” which is the 14th station on the list.
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UGA Skidaway Institute’s Edwards granted tenure

The University of Georgia has granted tenure to UGA Skidaway Institute of Oceanography / Department of Marine Sciences scientist Catherine Edwards. Edwards was also promoted from assistant professor to associate professor, effective Aug. 1.

OLYMPUS DIGITAL CAMERAEdwards is a physical oceanographer, with broad interdisciplinary interests in marine sciences and engineering. She earned a B.S. in physics with highest honors from the University of North Carolina at Chapel Hill, and worked as an ocean modeler at the U.S. Naval Research Laboratory before earning her Ph.D. in physical oceanography from the University of North Carolina at Chapel Hill. She joined Skidaway Institute in 2010.

Edwards’ research focuses on answering fundamental questions in coastal oceanography and fisheries sciences with autonomous underwater vehicles (AUVs). Using AUVs, also called gliders, she and her team are developing novel ways to optimize their use with engineering principles and real-time data streams from models and observations.

While at UGA Skidaway Institute, Edwards has been awarded more than $2 million dollars on 12 projects totaling more than $12 million from NOAA/Navy sources, the Gulf of Mexico Research Initiative and four different programs within the National Science Foundation. As the founder of a regional glider observatory, she serves as the lead scientist in a new project that places gliders in the paths of hurricanes to better predict their intensity at landfall. Edwards is a co-primary investigator in a large $5 million observational program studying exchange between the coastal and deep ocean at Cape Hatteras. In an effort funded by NSF’s Smart and Autonomous Systems program, Edwards is also working with researchers from Georgia Tech and Gray’s Reef National Marine Sanctuary to utilize gliders and acoustic tagging to track fish migrations.

UGA Skidaway Institute scientists participate in 2020 Ocean Sciences Meeting

The UGA Skidaway Institute of Oceanography was well represented at the 2020 Ocean Sciences Meeting in San Diego in February. The Ocean Sciences Meeting is the flagship conference for the ocean sciences and the larger ocean-connected community. The Ocean Sciences Meeting was co-sponsored by American Geophysical Union, the Association for the Sciences of Limnology and Oceanography, and The Oceanography Society.

Professor Marc Frischer said he was impressed by the efforts of the ocean science community to evolve the climate change dialog and narrative.

“As Margaret Leinen said in her closing plenary address, we started at ‘the ocean is too big to be affected’, to ‘the ocean is too big to fix,’ to where we are today, ‘the ocean is too important not to fix,’” Frischer said. “The call is for the ocean science community to become engaged in searching for solutions, and we have a lot to offer.” Leinen is the director of Scripps Institution of Oceanography.

Frischer presented some of his most recent work investigating the ecological significance of doliolids in continental shelf systems. In addition to that presentation, a student from Savannah State University, who worked in Frischer’s lab last summer, presented the results of work she conducted. Frischer mentored Ashly Rivera as part of Savannah State’s Research Experiences for Undergraduates program. At the end of each summer the REU students present their research and vote on who they think did the best job. The winner is awarded an all-expense paid trip to a science meeting of their choice. This past summer Rivera won that honor and chose to attend the Ocean Sciences Meeting. Ashly presented a poster titled “The Re-Acquisition of Shrimp Black Gill Infections by Penaeid Shrimp; Oceanic or Estuarine Sources?”

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Ashly Rivera (r) at her poster presentation.

Assistant professor Catherine Edwards co-chaired a session on western boundary current-shelf interaction. The session was inspired by her and fellow Skidaway Institute scientist Dana Savidge’s ongoing research into ocean currents around Cape Hatteras, “Processes driving Exchange at Cape Hatteras,” also known as PEACH. Edwards also presented a poster on the vertical structure of Hatteras and Gulf Stream fronts as part of a large group of PEACH researchers. She was a co-author on four other posters and two talks, including posters by Savidge and UGA Skidaway Institute research technician Ben Hefner. Hefner’s poster explored data from the multiple nested high frequency radars at PEACH, using different combinations of radials to get realistic data over Diamond Shoals at Cape Hatteras.

“With their high wave energy and treacherous conditions for sampling, the shallow waters of shoals are a very difficult places to get good data,” Edwards said.

Edwards’ poster looked at the vertical layering at the boundaries of Mid Atlantic Bight, South Atlantic Bight, and Gulf Stream water. “You see interleaving of up to five layers in just 20-30 meters water depth, which is important for exchange of heat and salt between the deep and shallow ocean,” Edwards said.

Assistant professor Adam Greer was the lead author and presented a poster titled “High-resolution sampling of a broad marine life size spectrum to examine shelf biophysical coupling.” He was also a co-author for three other posters and one oral presentation.

Associate professor Clifton Buck presented a poster titled “Aerosol trace element concentrations and fractional solubility in the North Pacific Ocean: US GEOTRACES GP-15 Pacific Meridional Transect.” He was also the co-author on an additional poster and two talks.

Professor Jay Brandes lead an oral presentation on “Variability of microplastics in estuarine systems and consequences for organism studies.”

“Studies of microplastic pollution have really taken off in the last couple of years,” Brandes said. “There were two solid days of talks and posters on the subject from around the world, from basic studies to community cleanup efforts. This level of interest would have been unheard of in past meetings.”

He was also a co-author for three poster presentations. Graduate student Kun Ma was the lead author on one of those poster presentations, “Constraining photochemical production rates of dissolved inorganic carbon in the open ocean using the moderate dissolved inorganic carbon (DI13C) isotope enrichment (MoDIE) method.”

Marine scientists map fish habitats

by Alan Flurry

Beyond the barrier islands of coastal Georgia, the continental shelf extends gradually eastward for almost 80 miles to the Gulf Stream. This broad, sandy shelf largely does not provide the firm foundation needed for the development of reef communities to support recreational and commercial fish species including grouper, snapper, black sea bass and amberjack.

“Natural and artificial reef habitats are important to Georgia fisheries because they provide hard, permanent structure on the Georgia shelf, which is dominantly a vast underwater desert of shifting sands,” said Clark Alexander, professor and director of the University of Georgia Skidaway Institute of Oceanography. “The Georgia Department of Natural Resources has invested significantly over the past several years in developing the capacity to map these areas to enhance the management of these reef communities.“

To increase the availability of high-quality hard bottom areas off Georgia, the DNR began an artificial reef-building program in 1971 to deploy materials at various locations across the continental shelf, from 2 to 30 miles offshore. Reef materials include concrete slabs and culverts from road, bridge and building demolition, subway cars, ships, barges, and U.S. Army tanks. Because some of these reefs are far offshore and DNR resources are limited, the status of some of that material has not been examined for decades.

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A bathymetric survey of Ossabaw Sound.

For the past five years, Alexander has been leading an effort to improve understanding of marine, coastal and estuarine habitats and functions using high-resolution sonar to map state water bottoms, with funding from the DNR Coastal Incentive Grant program. Alexander’s team has amassed critical depth and habitat information for five of Georgia’s sounds (Wassaw, Ossabaw, St. Catherine’s, Doboy and Sapelo), revealing deeply scoured areas where underwater cliffs have formed to create hard substrate where complex ecosystems and biological communities have developed.

“These inshore, hardbottom habitats should enhance biodiversity in the areas near these structures and enhance ecosystems supporting both commercial and recreational species across the continental shelf,” Alexander said.

Alexander is currently leading a new, three-year project mapping important fish habitats in state waters — the newly discovered estuarine habitats, and artificial reef structures within 10 nautical miles of shore – those areas most accessible to recreational anglers, boaters and divers. In addition, his research group is mapping previously unmapped portions of the sounds and tidal rivers deeper than 15 meters to discover the extent of these newly identified estuarine hardbottom habitats.

Skidaway Institute researchers will work with DNR to update the online “Boater’s Guide to Artificial Reefs” with accurate locations and imagery of deployed materials for these reefs. These new, more accurate artificial reef surveys will also document recent changes in the locations and integrity of placed materials and verify the low-tide water depths over all features in the artificial reefs to enhance navigational safety.

New high-tech microscope to bolster UGA Skidaway Institute’s microplastics research

A new, high-tech microscope is giving scientists at the University of Georgia Skidaway Institute of Oceanography a tool to study the tiniest particles and organisms in our environment in a whole new light. The Horiba Jobin Yvon XplorRA Plus Confocal Raman microscope uses lasers, rather than conventional light or a stream of electrons, to examine objects measuring smaller than a millionth of a meter or .04 thousandths of an inch.

“The way a Raman microscope works is fundamentally different from how conventional microscopes, such as those found in the classroom, operate,” UGA Skidaway Institute scientist Jay Brandes said. “With this instrument, a high energy laser beam is directed at the sample, and the instrument measures the light scattered back from it.”
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UGA Skidaway Institute researcher Jay Brandes with the Raman microscope.

What distinguishes it even more from traditional microscopes is a phenomenon called the Raman effect. This was discovered in the 1930s by Indian physicist Chandrasekhara Venkata Raman. With the Raman microscope, some of the scattered light comes from interactions with the molecules in the sample, and these interactions leave a spectral “fingerprint” that can be isolated from the laser light and measured. Those “fingerprints” can tell scientists what the material is made of, whether it is natural organics like bacteria or detritus, inorganic minerals or plastics.

“Because it uses a high tech, automated microscope to perform these measurements, maps of sample composition and even three-dimensional maps are possible,” Brandes said.

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The Raman microscope uses a laser to illuminate and analyze an object.

One immediate use for this instrument will be to study microplastic pollution in Georgia’s coastal environment. Brandes and a group of educators, students and volunteers, have been researching the microplastic pollution issue in coastal Georgia for several years. He says that locating and identifying microplastics in the environment or in an organism is difficult because of their tiny size.

“It’s not like it is a water bottle where you can look it and say ‘That’s plastic,’” Brandes said. “We see all kinds of microscopic particles, and, because they are so small and not always distinctively colored or shaped, it is difficult to distinguish microplastics from other substances.

“With this microscope, we will be able to look at a fiber and tell whether it is made of polyester, nylon, kevlar or whatever.”

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A microfiber as seen by the Raman microscope.

Brandes and his team have been looking at the microplastics problem from several angles. They have taken hundreds of water samples along the Georgia coast, filtered the samples and analyzed the captured particles and fibers. The researchers also examine marine organisms, like fish and oysters, to see what organisms are consuming the microplastics and to what extent.

The instrument will allow sub-micron analysis of complex samples from a wide variety of other projects. It will be available to UGA Skidaway Institute scientists as well as other scientists from throughout the Southeast. In addition to benefitting researchers, the Raman microscope will enhance educational programs conducted at Skidaway Institute and the through the UGA Department of Marine Sciences. Once a set of standard methods and protocols have been established, it will also be available to support scientific research from institutions and organizations from around the Southeast.

The instrument was purchased with a $207,000 grant from the National Science Foundation.

UGA Skidaway Institute scientists to study aerosol dust’s impact on life and chemistry in the ocean

A team of University of Georgia Skidaway Institute of Oceanography scientists has received a 4-year, $1 million grant from the National Science Foundation to study how dust in the atmosphere is deposited in the ocean and how that affects chemical and biological process there.

The research team of Clifton Buck, Daniel Ohnemus and Christopher Marsay will focus their efforts on a patch of the Pacific Ocean near Hawaii.

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Daniel Ohnemus (l) and Clifton Buck

“Our overall goal is to look at the aerosol loading and concentrations in the atmosphere, the rate that dust is deposited into the ocean and what happens to it once it is in the water column,” Buck said.

The chemistry of the ocean can be changed by the introduction and removal of elements, including trace elements which are present at low concentrations. In some cases, these elements are known to be vital to biological processes and ocean food webs. Near the shore, rivers are a large source for material from land to the ocean. Beyond the reach of rivers, and for most of the oceans, material blown from land through the air is the largest source of trace elements to surface waters.

“The ocean and the atmosphere are connected. What is in the atmosphere ends up in the ocean.” Ohnemus said. “Some part of what is in the ocean gets recycled back into the atmosphere, but mostly the movement is from the atmosphere to the ocean.”

The material enters the oceans dissolved in rain or by settling of dust particles. Understanding atmospheric sources of trace elements to the oceans is thus important to understanding both global chemical cycles and patterns of biological production. The team will look at trace metals like iron, which may appear in extremely low concentrations, but are essential to the growth of phytoplankton, the single-cell marine plants that serve as the base of the food web and produce approximately half the oxygen in the atmosphere. They will also look at other metals, like copper and cadmium, which are toxic and have a limiting influence on phytoplankton growth.

“Long-term atmospheric and ocean measurements are really hard to get at the same time in the same place, but that is what we are trying to do,” Ohnemus said.

Beginning in early 2021, the team will begin collecting aerosol samples at the Makai Research Pier on the southeast or windward side of Oahu. They will also undertake the first of six cruises to collect water samples at a spot in the Pacific known as the Hawaii Ocean Time-Series Station Aloha. This is a six-mile wide section of ocean approximately 200 kilometers from Oahu where oceanographers from around the world study ocean conditions over long time spans.

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This chart shows the location of the research field sites. Credit: Lee Ann DeLeo

A key goal of this project will be to obtain relatively frequent measurements over two full annual cycles. By taking weekly aerosol samples and water samples every few months, the researchers hope to be able to obtain a picture of how the atmosphere and the ocean change on a weekly, monthly or seasonal basis.

“It is important to point out that the dust transport over the North Pacific has a distinct seasonal cycle,” Buck said. “Dust concentrations are going to be different during the winter than they are in the summer.”

In the past there have been studies of aerosol dust concentrations in that region, but they were conducted at the top of the Mauna Loa volcano.

“That’s almost 12 thousand feet up, and not necessarily representative of what is being deposited in the ocean,” Buck said. “That is the leap we are trying to make here.”

The researchers chose Hawaii as the site for their field work for several reasons. Hawaii offers direct access to the remote, nutrient-limited open ocean. Hawaii also has strong seasonal fluctuations to its aerosol inputs, meaning there should be measurable changes over the two-year time series. The Hawaii Ocean Time Series has conducted regular research cruises to Station ALOHA since the mid-1980s, so there is already a historic collection of relevant data. From a practical standpoint, it also means the scientists will have regular access to those cruises to collect their ocean samples.

Although this project will not focus on marine plants, those plants are the reason the scientists want to answer questions about the marine chemistry.

“A very small amount of aerosol dust from a desert in China can provide enough nutrients to satisfy plant growth for weeks,” Ohnemus said. “So it can have a huge influence on which algae will grow where and how successful they are.”

Working with contractors from Florida International University, the research team will use a radioisotope of beryllium to measure the rate of atmospheric deposition. Beryllium-7 is created only in the upper atmosphere by the exposure of nitrogen and oxygen to cosmic rays, and has a half-life of 53 days. By measuring the concentration of beryllium-7 in samples, they will be able to estimate the deposition rate at which beryllium and other materials are being deposited on the surface.

The team will also contract with scientists at the University of Hawaii to collect aerosol samples on a more frequent basis than the Georgia-based researchers would be able to do themselves.

The project is funded by NSF Grant #1949660 totaling $1,074,114.

Become part of Skidaway Institute’s mission!

Dear Friends of Skidaway Institute,

In these days of coronavirus restrictions and an economic downturn, the UGA Skidaway Institute of Oceanography needs your support more than ever. You have probably heard that the governor has asked for 14% budget cuts from all state agencies for the fiscal year beginning July 1, and we are preparing for some serious belt tightening. I ask you to help us by making or increasing your membership donation to our non-profit fundraising arm, the Associates of Skidaway Institute.

Your financial support is very important in helping us to continue to achieve our research and education mission in service to the state of Georgia and the nation. Your membership donation will support a variety of expenses not covered by state funds, particularly associated with providing research opportunities for undergraduates, supporting graduate students and outfitting the labs of newly hired scientists. With the Institute faculty gaining a formal educational mission in our 2013 merger with UGA, on-going student support has become critical for us, as we seek to train the next-generation of scientists while continuing our research mission. I cannot overstate the value of your financial support and the flexibility that it gives us to provide support for students to train under Skidaway scientists.

Current membership provides benefits including our quarterly Skidaway Campus Notes newsletter, invitations to on-campus events like the Evening @ Skidaway seminar series, and in-lab visits with Skidaway faculty. Along with the tangible benefits of an Associates membership, you will know that you are supporting leading-edge research and education addressing some of the most pressing questions in ocean and environmental sciences.

For your convenience, you may begin or renew your membership online with a credit card. Simply click HERE. Or you can mail your donation to:

Associates of Skidaway Institute
10 Ocean Science Circle
Savannah, GA 31411

The Associates of Skidaway Institute is a unit of the University of Georgia Foundation, a 501(c)3 tax-exempt organization. All contributions are fully tax deductible.

Thank you in advance for your continuing interest and support.

Clark Alexander
Director
UGA Skidaway Institute of Oceanography

UGA Skidaway campus reacts to COVID-19 crisis

Like everyone else in the country, the organizations on the UGA Skidaway Marine Science Campus have been affected by the COVID-19 pandemic.

In mid-March, UGA Skidaway Institute cut back on all on-campus activities. Most active research was put on hold and faculty and staff were directed to telecommute as possible. Scheduled research and educational cruises on board the R/V Savannah were postponed. A small team of staff members continue to work on campus to maintain facilities and systems. Monthly Evening @ Skidaway public programs are cancelled, at least through the summer.

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Alexander

“Although we are currently pausing our research and educational efforts, we are eager to restart those programs as soon as it is safe to do so,” Director Clark Alexander said.

UGA Marine Extension and Georgia Sea Grant shut down operations about the same time. The UGA Aquarium closed, and all educational field trips were cancelled for the remainder of the school year.

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Risse

“Our biggest priorities in our response has been the health and safety of our staff and the public that we interact with regularly,” Mark Risse, director of Marine Extension and Georgia Sea Grant said. “For this reason, we made the hard decision to cancel many of our public programs and conferences this spring, as well as our summer marine science camps scheduled in June and July.”

Educators at the UGA Aquarium have transitioned several in-person public programs to virtual platforms. Registration is currently open for a series of engaging online events scheduled for June and July that focus on marine animals and coastal habitats. Learn more at gacoast.uga.edu/events.

Marine Extension and Georgia Sea Grant’s Shellfish Research Lab is supporting the aquaculture industry by providing technical assistance to shellfish growers and sharing information about COVID-related resources. A handful of extension specialists at the lab continue to keep the oyster hatchery running and are producing oyster seed for shellfish farmers on the coast.

Gray’s Reef National Marine Sanctuary remains open while its headquarters facilities on the UGA Skidaway Marine Science Campus are closed and staff is working from home. Most non-essential operations and research activities have been postponed, including the annual NOAA Ship Nancy Foster expedition, typically hosted in mid-July. The Gray’s Reef Expo on River Street has been tentatively rescheduled for November 21-22. Outreach from Gray’s Reef is focusing on digital and virtual events. Updates and additional news from the sanctuary be found at Gray’s Reef’s social media pages. This includes facebook.com/GraysReefSanctuaryor twitter.com/GraysReefNMS.

Marathon makes donation to Associates of Skidaway Institute

The organizers of the Skidaway Island Marathon, Endurance Race Services, donated $1,000 to the Associates of Skidaway Institute. Held on March 23 this year, the marathon supports a number of area non-profit groups. This is the fifth year the marathon has been held on the Skidaway campus. The donation will be used to support Skidaway Institute’s summer intern program.

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UGA Skidaway Institute external affairs manager Michael Sullivan (center) receives the check from title sponsor Optim Healthcare director of marketing Meg Pace and Endurance Race Services’ Dan Pavlin.

 

UGA Skidaway Institute scientists publish two papers on Arctic processes

The Arctic is experiencing the effects of climate change faster than anywhere on the planet, yet it is one of the least understood regions, due largely to the difficulty of making observations and collecting samples there. With the support of National Science Foundation funding, two University of Georgia Skidaway Institute of Oceanography scientists are studying the biogeochemical processes in the Arctic and recently had their research published in two peer-reviewed science journals.

Postdoctoral researcher Christopher Marsay and assistant professor Clifton Buck have been participants in the international GEOTRACES program which aims to improve the understanding of biogeochemical cycles in the ocean, focusing on important trace elements. Trace elements are present in the ocean in very low concentrations, however some of those elements are essential for marine life and can influence the functioning of ocean ecosystems while others are potentially toxic to plants and animals.

Cliff Buck works with deck equipment during a GEOTRACES cruise in the Pacific Ocean.

“The Arctic part of the GEOTRACES program is particularly important because the region is already showing significant changes as a result of climate change and is relatively poorly studied with respect to many trace elements,” Marsay said.

Marsay is the lead author on both papers, which are the result of analysis of samples he collected on a 64-day GEOTRACES cruise from Dutch Harbor, Alaska to the North Pole and back from August through October 2015.

“On this cruise, our research goals were to describe the chemistry of atmospheric deposition to the region,” Buck said. “These data will then be shared with the scientific community to help better understand biogeochemical cycling of trace elements in the Arctic Ocean.”

The first paper, published in the journal Chemical Geology, describes the concentrations of 11 trace elements in atmospheric samples that Marsay collected during the cruise by pumping large volumes of air through filters. The sources of this material could include natural material from land surfaces, smoke and soot from burning vegetation, and emissions from industrial activity.

“We compare the results to other ocean regions and speculate as to the sources of the material reaching the Arctic,” Marsay said. “An important part of the work is that we used the concentration data to estimate how much of these chemicals settle from the atmosphere to the surface of the ocean.”

In addition to Marsay and Buck, co-authors included David Kadko from Florida International University, William Landing and Brent Summers from Florida State University, and Peter Morton from the National High Magnetic Field Laboratory.

The second paper was published in the journal Marine Chemistry. In it, Marsay and his co-authors examine trace elements in Arctic melt ponds. Melt ponds are a widespread feature of the sea ice in the Arctic during the summer months. As snow melts it forms ponds on top of the ice which eventually drain into the surface ocean.

Chris Marsay collecting samples at the North Pole.

“Melt ponds are an important intermediate step in atmospheric deposition to the surface ocean that is unique to the polar regions and not very well studied,” Marsay said. “Ongoing climate change in the Arctic will change this pathway, and we want to know how that may affect distribution and biological availability of trace elements in the surface ocean.”

The paper brought together measurements of several trace elements made by different research groups involved in the GEOTRACES project. It showed that the chemistry in melt ponds is also influenced by material in sea ice and the seawater beneath the ice, which modifies the chemistry of material deposited from the atmosphere before it reaches the surface ocean.

Additional co-authors on the paper included Ana Aguilar-Islas from the University of Alaska Fairbanks, Jessica Fitzsimmons, Laramie Jensen and Nathan Lanning from Texas A&M University, Mariko Hatta from University of Hawai’i at Manoa, Seth John and Ruifeng Zhang from the University of Southern California, David Kadko from Florida International University, William Landing from Florida State University, Peter Morton from the National High Magnetic Field Laboratory, Angelica Pasqualini from Columbia University, Sara Rauschenberg and Benjamin Twining from the Bigelow Laboratory for Ocean Sciences, Robert Sherrell from Rutgers University, and Alan Shiller and Laura Whitmore from the University of Southern Mississippi.

The two papers can be accessed through the UGA Skidaway Institute website at: https://www.skio.uga.edu/research/research-publications/.